Genescript Annotation Pipeline

dbindex

• SYNOPSIS
• REQUIRES
• DESCRIPTION
• ARGUMENTS
• BUGS
• SEE ALSO

SYNOPSIS

 dbindex [-index=fasta.index] <file1.fasta> <file2.fasta> ...

REQUIRES

perl5.6, Getopt::Long, Bio::Index::Fasta

DESCRIPTION

This program indexes multiple on or multiple FASTA files. The index is aware of the location of the FASTA files and so FASTA files should only be index from their final destination position.

ARGUMENTS

-index fasta.index

The name of the index file to create. Defaults to fasta.index.

file1.fasta file2.fasta ...

Although Genescript requires each FASTA file be indexed separately, dbindex is capable of indexing multiple files using a single index.

BUGS

None known.

SEE ALSO

perl(1), dbfetch(5)