The Hospital for Sick Children
Mailing List
Join the TCAG mailing list
 
Acknowledgment
Acknowledgment Policy »»
 
Microsatellite Markers

Genotyping available with fluorescently labelled microsatellite markers (di, tri, tetranucleotide repeats). A list of the markers that we currently have is provided below. Aliquots of these markers can be made available upon request.

Quick Search by Chromosome
1    2    3    4    5    6    7    8    9    10    11    12   
13    14    15    16    17    18    19    20    21    22    XY   


Genetic Markers for Chromosome 4
Marker Name Location Start End Size Range Hetero- zygosity Repeat Type Annealing Temperature Abi
D4S2935 4p16.1 6625422 6625773 104-120 0.62 53 √
D4S394 4p16.1 7024409 7024766 189-223 0.78 dinucleotide 58.1
D4S2983 4p16.1 7809982 7810325 212-254 0.87 dinucleotide 41
D4S1599 4p16.1 10646666 10647010 142-156 0.82 dinucleotide 53.9
D4S2281 4p16.1 10705420 10706096 382 1 tetranucleotide 58.1
D4S3036 4p15.33 11969826 11970128 162-178 0.81 dinucleotide 58.1
D4S2311 4p15.33 13325731 13326405 372 0.83 tetranucleotide 53
D4S403 4p15.33 13501710 13502049 217-231 0.77 dinucleotide 53 √
D4S3048 4p15.32 15757945 15758313 233-253 0.8 dinucleotide 59.3
D4S1525 4p15.32 16334277 16334710 250 0.9 penta 60
D4S419 4p15.32 18599642 18599992 222-238 0.77 53 √
D4S3022 4p15.2 25365412 25365751 117-149 0.89 dinucleotide 49
D4S2305 4p15.2 25756353 25757029 397 0.80 tetranucleotide
D4S2397 4p15.2 27008683 27008928 126-144 0.88 trinucleotide 50.8
D4S391 4p15.2 27363115 27363563 164-185 0.85 dinucleotide 53 √
D4S2408 4p15.1 31055113 31055396 281 0.55 tetranucleotide 49.3
D4S405 4p14 40268053 40268457 279-299 0.86 53 √
D4S1592 4q12 57597352 57597699 170-196 0.72 53 √
D4S3248 4q13.1 60024834 60025180 233-257 0.67 tetranucleotide 60.8
D4S392 4q13.3 70838837 70839123 93-107 0.82 53 √
D4S1517 4q13.3 74816197 74816637 225 58
D4S3042 4q21.1 77364258 77364642 179-231 55
D4S2393 4q21.1 77952760 77953065 103-115 55
D4S2630 4q21.21 79567700 79568053 194-214 55
D4S2964 4q21.21 81233707 81234020 159-197 0.76 53 √
D4S2922 4q21.22 82902075 82902409 258-268 55
D4S395 4q21.23 84704596 84704842 113-137 55
D4S1534 4q21.23 86766686 86766873 146-158 0.77 53 √
D4S414 4q22.1 92897054 92897423 237 0.89 53 √
D4S1572 4q24 104228407 104228750 135-151 0.84 53 √
D4S406 4q25 112177195 112177545 234-258 0.87 53 √
D4S402 4q26 120606998 120607296 287-323 0.91 53 √
D4S2938 4q28.2 129778253 129778595 160-176 0.78 dinucleotide 48
D4S1575 4q28.3 135249176 135249551 219-223 0.65 53 √
D4S424 4q31.21 142775272 142775615 178-192 0.83 53 √
D4S413 4q32.1 158930781 158931111 128-166 0.85 53 √
D4S1597 4q32.3 170539004 170539397 273-293 0.76 53 √
D4S1539 4q34.1 176384029 176384370 221-229 0.68 53 √
D4S415 4q34.3 179406990 179407306 183 0.8 53 √
D4S2417 4q34.3 180864365 180864634 251-271 0.67 tetranucleotide 52.7
D4S1554 4q35.1 185384459 185384785 184-208 0.86 dinucleotide 61
D4S1535 4q35.1 185931639 185931988 177-191 0.77 53 √
D4S2924 4q35.1 187147894 187148216 228-242 0.72 dinucleotide
D4S426 4q35.2 189803541 189803828 177-191 0.76 53 √
STK18-GT22 4 215 dinucleotide 58.1
STK18-AAAT11 4 249-252 tetranucleotide 60.5
STK18-AC13 4 223 dinucleotide 48
STK18-AC18 4 297 dinucleotide 60.5
STK18-CA17 4 292 dinucleotide 58.1
STK18-AT12 4 295 dinucleotide 58.1
D4S412 4p16.3 3412068 3412389 237-249 0.77 53 √
D4S1355 4q13.3 75937122 75937451 159 55
D4S2958 4q21.1 77171715 77172003 190 0.61 di 55